R interface for FDA Adverse Event Reporting System
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Apr 10, 2026 - R
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faers
Here are 23 public repositories matching this topic...
Co-occurrence analysis in pubmed and faers of two lists of terms.
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Mar 8, 2025 - Jupyter Notebook
OpenSource FAERS Database Cleansing, Merging and Analysis using postgresql
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Jan 23, 2021 - Python
Code and Datasets for the paper "Towards early detection of adverse drug reactions: combining pre-clinical drug structures and post-market safety reports", published on BMC Medical Informatics and Decision Making in 2019.
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Aug 16, 2020 - Python
Code and Datasets for the paper "A Computational Framework for Identifying Age Risks in Drug-Adverse Event Pairs", published on AMIA 2022 Informatics Summit.
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Jan 7, 2022 - R
Drug Side Effect Checker - The Pharmacovigilance Dashboard Prototype build with FDA (FAERS) data
fda data-visualisation adverse-events side-effects drug-safety pharmacovigilance design-principles adverse-drug-reaction faers dashboards-tableau design-science-research fda-api
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Aug 9, 2023 - Jupyter Notebook
Step1-Step6 preprocessing workflow and final FAERS compound-PT-SOC core graph releases with standardized compounds, MedDRA PT/SOC mapping, and three pruned graph versions.
knowledge-graph drugbank compound pt data-preprocessing soc smiles rxnorm pharmacovigilance inchikey biomedical-data faers meddra adverse-drug-reactions heterograph
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Apr 23, 2026 - Python
MCP server for FDA data: drug approvals, recalls, adverse events, 510(k) device clearances. Wraps openFDA.
mcp fda recall cursor claude openfda faers 510k drug-approval model-context-protocol mcp-server clinical-llm
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Jun 11, 2026 - TypeScript
教學用 FAERS ADR 嫌疑藥排序工具：反向查詢 + ROR/PRR 不相稱性 + 時序加權 + Naranjo/WHO-UMC 因果評分。非臨床決策工具。
education adr signal-detection openfda pharmacovigilance polypharmacy faers adverse-drug-reactions naranjo
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Jun 17, 2026 - HTML
Open-source pharmacovigilance engine for FDA adverse event signal detection. Provides validated statistical primitives (PRR, ROR, IC), MedDRA mapping, and reproducibility tools for drug safety research.
data-visualization adverse-events drug-safety openfda pharmacovigilance medical-data faers healthcare-analytics
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Jun 1, 2026 - TypeScript
Honest evaluation of emergent 3-drug interaction prediction from FAERS using GNNs
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Apr 18, 2026 - Python
Public reproducibility package for OAB–AF analyses using FAERS/JADER (figures, scripts, derived inputs).
atrial-fibrillation pharmacovigilance faers jader time-to-onset mirabegron solifenacin disproportionality-analysis
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Sep 7, 2025 - Python
Workspace-scale adverse-event horizon scanner — BOCPD + Poisson z-score + CUSUM ensemble with Benjamini–Hochberg FDR control. Workspace-scope A2A agent, signed FHIR DetectedIssue output.
python agent statistics surveillance mcp healthcare fhir adverse-events pharmacovigilance cusum a2a clinical-ai faers bocpd
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May 24, 2026 - Python
Local drug safety signal detection using OpenSearch + Qwen3.5. PRR/ROR/EBGM + Mantel-Haenszel. No API keys, no cloud, no licenses.
gemma prr opensearch drug-safety pharmacovigilance faers local-ai llm-agents langgraph google-adk ebgm
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Jun 3, 2026 - Python
Code and public poster materials for a CHEST 2024 abstract on hypercapnic respiratory failure adverse-event reporting in clinical trials
reproducible-research stata clinical-trials adverse-events drug-safety faers clinicaltrials-gov hypercapnia hypoventilation respiratory-depression
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Jun 5, 2026 - Jupyter Notebook
openFDA APIs.json profile
government fda open-data public-health adverse-events spl drug-safety regulatory tobacco recalls food-safety medical-devices apis-json faers naftiko food-and-drug-administration drug-labels
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Jun 20, 2026
Automated pharmacovigilance literature validation for ultra‑rare neurological diseases. Enter a drug name and an adverse event. The app searches PubMed with a multi‑tier cascade, extracts the most relevant evidence, and returns a verdict — Present or Absent — backed by a fine‑tuned PubMedBERT model.
open-source benchmark gradio signal-detection natural-language-inference zero-shot zero-shot-learning drug-safety few-shot pharmacovigilance few-shot-learning rare-disease huggingface faers ntd biomedical-nlp pubmedbert literature-validation
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Jun 21, 2026 - Python
Local-first multi-agent pharmacovigilance system using LangGraph, Llama 3.1, and FDA FAERS data for adverse event signal detection (PRR/ROR).
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Jun 21, 2026 - Python
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