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Hmmm...my code works...that's not right
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Hmmm...my code works...that's not right

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thejoshbq/README.md

Joshua Boquiren


👨🏻‍💻  About Me

💡 I'm a software developer and data analyst for the Otis Lab at the Medical University of South Carolina.

💻 Current project(s):

  • Pynapse - a custom Python library for aligning 2-photon microscopy trace recordings with accompanying behavioral event logs and extracting neural data at event windows for analysis
  • REACHER - an open-source Python-based framework for managing experiments with head-fixed rodents and data acquisition
  • The Labrynth - a deployable Panel-based frontend built using REACHER
  • ChangeGenius - a change-request management system with integrated LLM for expidited processes and database queries

✍️ Outside of code, I’m into:

  • Hiking scenic trails
  • Playing disc golf
  • Traveling to new places
  • Finding the best local coffee spots

💬 Unapologetically, pineapple belongs on pizza and the only correct way to drink coffee is black.


"The heavens declare the glory of God, and the sky above procaims His handiwork." - Psalm 19:1


GitHub Stats

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  1. Otis-Lab-MUSC/doncheck-et-al-nature-protocols-2026 Otis-Lab-MUSC/doncheck-et-al-nature-protocols-2026 Public

    Accompanying repository to Nature Protocols paper: "Drug self-administration in head-fixed mice" by Elizabeth M. Doncheck et al. (2026).

    1 1

  2. PFC-Self-Admin PFC-Self-Admin Public

    A pipeline analysis of the prefrontal cortex region in mice under various reinstatement tests.

    Python

  3. CSCI495-Modus21/change-genius CSCI495-Modus21/change-genius Public

    A CofC CSCI 495 Capstone project in collaboration with Modus21.

    Jupyter Notebook 2

  4. pynapse pynapse Public

    A custom Python library for managing and exploring 2-photon microscopy imaging data and event logs.

    1