Release v2.4.11

🎉 New Release

Available Downloads

Python Package

• Wheel: hbat-2.4.11-py3-none-any.whl
• Source: hbat-2.4.11.tar.gz

Standalone Applications

• macOS: hbat-2.4.11.dmg
• Linux:
  • hbat-linux-binaries-2.4.11.zip - Standalone executables (HBAT-GUI and hbat)
  • HBAT-2.4.11-x86_64.AppImage - AppImage package
  • hbat_2.4.11_amd64.deb - Debian package

Conda Package

• hbat-2.4.11-py0.conda

Documentation

• hbat-docs-2.4.11.zip - Full HTML documentation

Installation

PIP:

pip install https://github.com/abhishektiwari/hbat/releases/download/v2.4.11/hbat-2.4.11-py3-none-any.whl

PyPI:

pip install hbat

Conda:

conda install -c hbat hbat

Pre-release v2.4.11rc501781400643

🚧 Pre-release build for PR #50

This is an automated pre-release build. Use for testing purposes only.

Available Downloads

Python Package

• Wheel: hbat-2.4.11rc501781400643-py3-none-any.whl
• Source: hbat-2.4.11rc501781400643.tar.gz

Standalone Applications

• macOS: hbat-2.4.11rc501781400643.dmg
• Linux:
  • hbat-linux-binaries-2.4.11rc501781400643.zip - Standalone executables (HBAT-GUI and hbat)
  • HBAT-2.4.11rc501781400643-x86_64.AppImage - AppImage package
  • hbat_2.4.11rc501781400643_amd64.deb - Debian package

Conda Package

• hbat-2.4.11rc501781400643-py0.conda

Documentation

• hbat-docs-2.4.11rc501781400643.zip - Full HTML documentation

Installation

PIP:

pip install https://github.com/abhishektiwari/hbat/releases/download/v2.4.11rc501781400643/hbat-2.4.11rc501781400643-py3-none-any.whl

PyPI:

pip install hbat==2.4.11rc501781400643

Conda:
Download the package and install locally

Release v2.4.10

🎉 New Release

Available Downloads

Python Package

• Wheel: hbat-2.4.10-py3-none-any.whl
• Source: hbat-2.4.10.tar.gz

Standalone Applications

• macOS: hbat-2.4.10.dmg
• Linux:
  • hbat-linux-binaries-2.4.10.zip - Standalone executables (HBAT-GUI and hbat)
  • HBAT-2.4.10-x86_64.AppImage - AppImage package
  • hbat_2.4.10_amd64.deb - Debian package

Conda Package

• hbat-2.4.10-py0.conda

Documentation

• hbat-docs-2.4.10.zip - Full HTML documentation

Installation

PIP:

pip install https://github.com/abhishektiwari/hbat/releases/download/v2.4.10/hbat-2.4.10-py3-none-any.whl

PyPI:

pip install hbat

Conda:

conda install -c hbat hbat

What's Changed

• Change Analysis Mode Semantics by @abhishektiwari in #48

Release Notes: Analysis Mode Semantics

Breaking Changes

Analysis modes have been renamed to clearly describe interaction inclusion behavior:

Previous value	New value	Behavior
local	inter	Includes interactions between different residues only
complete	all	Includes both inter-residue and intra-residue interactions

The legacy local and complete values are no longer accepted.

Changed

• Changed the default analysis_mode from local to inter.
• Updated CLI, desktop GUI, web UI, presets, examples, and documentation to use inter and all.
• Applied analysis-mode filtering consistently across:
  • Hydrogen bonds
  • Halogen bonds
  • Pi interactions
  • Pi-pi interactions
  • Carbonyl interactions
  • n→π interactions
• Centralized same-residue filtering logic in the core analyzer.
• Added parameter validation when constructing an analyzer.
• Added preset validation for CLI and desktop GUI workflows.
• Invalid presets are rejected without replacing the current GUI parameters.

Migration

Update API calls and preset files:

# Before
AnalysisParameters(analysis_mode="local")
AnalysisParameters(analysis_mode="complete")

# After
AnalysisParameters(analysis_mode="inter")
AnalysisParameters(analysis_mode="all")

Update CLI commands:

# Before
hbat input.pdb --mode local

# After
hbat input.pdb --mode inter

Testing

• Added direct behavioral tests for every interaction detector under both modes.
• Added tests confirming legacy values are rejected through API, CLI, and preset-loading paths.
• Added tests confirming canonical modes preserve the intended legacy semantics.
• Renamed stale mode terminology in performance tests.
• Focused parameter, CLI, preset, and mode-semantic tests pass.

Full Changelog: v2.4.9...v2.4.10

Pre-release v2.4.10rc491781312126

🚧 Pre-release build for PR #49

This is an automated pre-release build. Use for testing purposes only.

Available Downloads

Python Package

• Wheel: hbat-2.4.10rc491781312126-py3-none-any.whl
• Source: hbat-2.4.10rc491781312126.tar.gz

Standalone Applications

• macOS: hbat-2.4.10rc491781312126.dmg
• Linux:
  • hbat-linux-binaries-2.4.10rc491781312126.zip - Standalone executables (HBAT-GUI and hbat)
  • HBAT-2.4.10rc491781312126-x86_64.AppImage - AppImage package
  • hbat_2.4.10rc491781312126_amd64.deb - Debian package

Conda Package

• hbat-2.4.10rc491781312126-py0.conda

Documentation

• hbat-docs-2.4.10rc491781312126.zip - Full HTML documentation

Installation

PIP:

pip install https://github.com/abhishektiwari/hbat/releases/download/v2.4.10rc491781312126/hbat-2.4.10rc491781312126-py3-none-any.whl

PyPI:

pip install hbat==2.4.10rc491781312126

Conda:
Download the package and install locally

Release v2.4.9

🎉 New Release

Available Downloads

Python Package

• Wheel: hbat-2.4.9-py3-none-any.whl
• Source: hbat-2.4.9.tar.gz

Standalone Applications

• macOS: hbat-2.4.9.dmg
• Linux:
  • hbat-linux-binaries-2.4.9.zip - Standalone executables (HBAT-GUI and hbat)
  • HBAT-2.4.9-x86_64.AppImage - AppImage package
  • hbat_2.4.9_amd64.deb - Debian package

Conda Package

• hbat-2.4.9-py0.conda

Documentation

• hbat-docs-2.4.9.zip - Full HTML documentation

Installation

PIP:

pip install https://github.com/abhishektiwari/hbat/releases/download/v2.4.9/hbat-2.4.9-py3-none-any.whl

PyPI:

pip install hbat

Conda:

conda install -c hbat hbat

Pre-release v2.4.9rc481781308628

🚧 Pre-release build for PR #48

This is an automated pre-release build. Use for testing purposes only.

Available Downloads

Python Package

• Wheel: hbat-2.4.9rc481781308628-py3-none-any.whl
• Source: hbat-2.4.9rc481781308628.tar.gz

Standalone Applications

• macOS: hbat-2.4.9rc481781308628.dmg
• Linux:
  • hbat-linux-binaries-2.4.9rc481781308628.zip - Standalone executables (HBAT-GUI and hbat)
  • HBAT-2.4.9rc481781308628-x86_64.AppImage - AppImage package
  • hbat_2.4.9rc481781308628_amd64.deb - Debian package

Conda Package

• hbat-2.4.9rc481781308628-py0.conda

Documentation

• hbat-docs-2.4.9rc481781308628.zip - Full HTML documentation

Installation

PIP:

pip install https://github.com/abhishektiwari/hbat/releases/download/v2.4.9rc481781308628/hbat-2.4.9rc481781308628-py3-none-any.whl

PyPI:

pip install hbat==2.4.9rc481781308628

Conda:
Download the package and install locally

Release v2.4.8

🎉 New Release

Available Downloads

Python Package

• Wheel: hbat-2.4.8-py3-none-any.whl
• Source: hbat-2.4.8.tar.gz

Standalone Applications

• macOS: hbat-2.4.8.dmg
• Linux:
  • hbat-linux-binaries-2.4.8.zip - Standalone executables (HBAT-GUI and hbat)
  • HBAT-2.4.8-x86_64.AppImage - AppImage package
  • hbat_2.4.8_amd64.deb - Debian package

Conda Package

• hbat-2.4.8-py0.conda

Documentation

• hbat-docs-2.4.8.zip - Full HTML documentation

Installation

PIP:

pip install https://github.com/abhishektiwari/hbat/releases/download/v2.4.8/hbat-2.4.8-py3-none-any.whl

PyPI:

pip install hbat

Conda:

conda install -c hbat hbat

Pre-release v2.4.8rc471780872947

🚧 Pre-release build for PR #47

This is an automated pre-release build. Use for testing purposes only.

Available Downloads

Python Package

• Wheel: hbat-2.4.8rc471780872947-py3-none-any.whl
• Source: hbat-2.4.8rc471780872947.tar.gz

Standalone Applications

• macOS: hbat-2.4.8rc471780872947.dmg
• Linux:
  • hbat-linux-binaries-2.4.8rc471780872947.zip - Standalone executables (HBAT-GUI and hbat)
  • HBAT-2.4.8rc471780872947-x86_64.AppImage - AppImage package
  • hbat_2.4.8rc471780872947_amd64.deb - Debian package

Conda Package

• hbat-2.4.8rc471780872947-py0.conda

Documentation

• hbat-docs-2.4.8rc471780872947.zip - Full HTML documentation

Installation

PIP:

pip install https://github.com/abhishektiwari/hbat/releases/download/v2.4.8rc471780872947/hbat-2.4.8rc471780872947-py3-none-any.whl

PyPI:

pip install hbat==2.4.8rc471780872947

Conda:
Download the package and install locally

Pre-release v2.4.8rc471780872703

🚧 Pre-release build for PR #47

This is an automated pre-release build. Use for testing purposes only.

Available Downloads

Python Package

• Wheel: hbat-2.4.8rc471780872703-py3-none-any.whl
• Source: hbat-2.4.8rc471780872703.tar.gz

Standalone Applications

• macOS: hbat-2.4.8rc471780872703.dmg
• Linux:
  • hbat-linux-binaries-2.4.8rc471780872703.zip - Standalone executables (HBAT-GUI and hbat)
  • HBAT-2.4.8rc471780872703-x86_64.AppImage - AppImage package
  • hbat_2.4.8rc471780872703_amd64.deb - Debian package

Conda Package

• hbat-2.4.8rc471780872703-py0.conda

Documentation

• hbat-docs-2.4.8rc471780872703.zip - Full HTML documentation

Installation

PIP:

pip install https://github.com/abhishektiwari/hbat/releases/download/v2.4.8rc471780872703/hbat-2.4.8rc471780872703-py3-none-any.whl

PyPI:

pip install hbat==2.4.8rc471780872703

Conda:
Download the package and install locally

Pre-release v2.4.8rc471780871884

🚧 Pre-release build for PR #47

This is an automated pre-release build. Use for testing purposes only.

Available Downloads

Python Package

• Wheel: hbat-2.4.8rc471780871884-py3-none-any.whl
• Source: hbat-2.4.8rc471780871884.tar.gz

Standalone Applications

• macOS: hbat-2.4.8rc471780871884.dmg
• Linux:
  • hbat-linux-binaries-2.4.8rc471780871884.zip - Standalone executables (HBAT-GUI and hbat)
  • HBAT-2.4.8rc471780871884-x86_64.AppImage - AppImage package
  • hbat_2.4.8rc471780871884_amd64.deb - Debian package

Conda Package

• hbat-2.4.8rc471780871884-py0.conda

Documentation

• hbat-docs-2.4.8rc471780871884.zip - Full HTML documentation

Installation

PIP:

pip install https://github.com/abhishektiwari/hbat/releases/download/v2.4.8rc471780871884/hbat-2.4.8rc471780871884-py3-none-any.whl

PyPI:

pip install hbat==2.4.8rc471780871884

Conda:
Download the package and install locally