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Medical Imaging Explainability

Three ways to ask a medical image classifier "where are you looking", shown together so you can compare them: Grad-CAM, Grad-CAM++, and occlusion sensitivity. In a clinical setting a saliency map that lands on the wrong anatomy is a warning sign, and the three methods agreeing is a quick way to trust the answer.

Using it

pip install -r requirements.txt
python src/explain.py --image chest.png --out outputs/

It runs on a torchvision DenseNet121 straight away, so you can confirm it works without a trained checkpoint, and the same code moves onto your own model by swapping the backbone and the target layer.

You get three overlays out: gradcam.png, gradcampp.png and occlusion.png. The occlusion map is the honest cross check, it slides a patch across the image and measures how much the prediction drops, with no gradient tricks involved, so where it agrees with Grad-CAM you can be fairly sure the attention is real.

About

GradCAM, SHAP, and LIME for model explainability in medical imaging applications

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