README BOOT........................................................................PWR ON|          ..:...                 
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|                  |NAME.....................................................Elliot Chan||        :-:.  ..:-..             
|                  |UPTIME......................................................23 Years||     ..:-...-...-...::..     ..::
|     [WHOAMI]     |OS.........................................Ubuntu 24.04.4 LTS x86_64||    .::-.::.      ..:::-:.:::..::
|                  |TECH_LANGUAGES...............................Python+R+HTML+JSON+YAML|| ..:::--:...:.           .:..:.  
|                  |IRL_LANGUAGES...............................English+French+Cantonese||:=-:-.       .:.       .-...:.  .
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|                  |ONLINE........................... Experimenting with ML from Scratch||       :-:::--:------:.     :. .:
|                  |      .................................Translating Biology into Code||                          .:. .:.
|    [HOBBIES?]    |      ................................Customimzing my IDE & Terminal||:-.                      .:...:. 
|                  |IRL..............................Combat Sports: Muay Thai and Boxing||  .:.                 ...-. :.   
|                  |   .......................General Fitness: Sprinting + Running + S&C||    .:.       ..:-::-:.    :.   .
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FLAGSHIP PROJECTS................................................................POWER ON|                    ..:...:.     
NANOMAKER..........................................................................ONLINE|.                ..-.. ..-.     .
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| ░█▀█░█▀█░█▀█░█▀█░█▄█░█▀█░█░█░█▀▀░█▀▄ |  A dual cross-attention transformer framework  ||    .-::...:::.      .:.  .:.    
| ░█░█░█▀█░█░█░█░█░█░█░█▀█░█▀▄░█▀▀░█▀▄ |  engineered for high-affinity protein binding  ||        ..          .:.  ::      
| ░▀░▀░▀░▀░▀░▀░▀▀▀░▀░▀░▀░▀░▀░▀░▀▀▀░▀░▀ |  pocket design, 3D visualization and analysis  ||                  .:.  .-.     ..
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NanoMaker applies transformer logic towards the biochemical protein space.               |                   .::.   .::.   
Through Inverse Radial Sequencing, NanoMaker turns a disorganized, messy 3D structure    |                 .::.    .:.   .-
into a clear sentence-like coordinate set.                                               |           ....-:     ..-    .:. 
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7M sequence windows, 0.1nM affinity, zero-shot data split.                               |                 .:::.   .::.    
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DOCUMENTATION: ARCHITECTURE/CONCEPT_VISUALIZATIONS/TESTRUN/BENCHMARKS 
NANOMAKER: ONLINE
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PRISMATIC..........................................................................ONLINE|...:=-=:..             . ..---=--
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| A full-stack ML web platform for computational | ░█▀█░█▀▄░▀█▀░█▀▀░█▄█░█▀█░▀█▀░▀█▀░█▀▀ ||=.     :-..:=-::... .            
| genetic variant pathogenicity screening and    | ░█▀▀░█▀▄░░█░░▀▀█░█░█░█▀█░░█░░░█░░█░░ ||-::-:.....:...                   
| repair.                                        | ░▀░░░▀░▀░▀▀▀░▀▀▀░▀░▀░▀░▀░░▀░░▀▀▀░▀▀▀ ||      .:::.  .:.         ....    
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By presenting PRISMATIC with the chromosome number and sequence strings of a             |..:-:.      ::.  :--:=-.     ..:=
mutation, 500+ features are extracted on the DNA and Protein level.                      |    ..::.    .:. .:::-----::.----
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Leveraging the resulting "mutation fingerprint", the deployed model will then predict    |...      .:.   .:.   .:.      .::
the probability of said mutation's pathogenicity & benignity. Includes my custom         |  .::.     ::    :.    .::.      
guided mutation algorithm "ReGen" to reduce mutations' pathogenicity.                    |     ::.    .:.  .:..    ..:.    
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Model performance is 0.90 ROC-AUC, 0.9 PR-AUC, and 0.82 F1 from sequence strings alone.  |.:-:...  .:.. .:.    .:      .:. 
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PRISMATIC_LIVE_DEMO: ONLINE                                         
PRISMATIC_PARENT_PROJECT_DOCUMENTATION: FEATURE_ENG/CONCEPTS 
PROJECT_GEM: ONLINE                                              
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LOAD_CONTACT_INFO......................................................................OK| ..........           .::.  ::::.
CURRENTLY_SEEKING...................................ENTRY-LEVEL BIOINFORMATICS / ML ROLES|:.       .::::::..       ::. .:..
EMAIL: e224chan@uwaterloo.ca                                                             |      ..       ....::.    .:.  .:
PHONE_NUMBER_CAD: +1_647_241_6175                                                        |  .-:    .:-:..      .:.    ::.  
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PROJECT_PORTFOLIO_WEBSITE: ONLINE                                                        |:               .::.   .:     .:.