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[project]
site_name = "Bodhi HPC User Guide"
site_url = "https://rnabioco.github.io/bodhi-docs/"
repo_url = "https://github.com/rnabioco/bodhi-docs"
repo_name = "rnabioco/bodhi-docs"
nav = [
{"Home" = "index.md"},
{"SLURM" = [
{"Migration Guide" = [
{"Directives" = "directives.md"},
{"Commands" = "commands.md"},
{"Environment Variables" = "environment-variables.md"},
{"Job Arrays" = "job-arrays.md"},
{"Common Pain Points" = "pain-points.md"},
]},
{"Examples" = [
{"Scripts" = "example-scripts.md"},
{"Converter" = "conversion-script.md"},
{"Interactive Sessions" = "sinteractive.md"},
{"GPU Jobs" = "gpu.md"},
{"Login Splash" = "login-splash.md"},
]},
{"Resources" = "resources.md"},
]},
{"Positron SSH" = "https://github.com/rnabioco/remote-ssh-positron"},
{"Backups" = [
{"Backup Instructions" = "backups.md"},
{"PetaLibrary" = "https://curc.readthedocs.io/en/latest/petalibrary/index.html#"},
]},
{"Admin" = "admin.md"},
{"Getting Help" = "getting-help.md"},
]
[project.theme]
variant = "classic"
features = [
"content.code.copy",
"content.tabs.link",
"navigation.instant",
"navigation.sections",
"navigation.top",
"toc.follow",
]
[[project.theme.palette]]
media = "(prefers-color-scheme: light)"
scheme = "default"
primary = "indigo"
accent = "indigo"
toggle.icon = "lucide/sun"
toggle.name = "Switch to dark mode"
[[project.theme.palette]]
media = "(prefers-color-scheme: dark)"
scheme = "slate"
primary = "indigo"
accent = "indigo"
toggle.icon = "lucide/moon"
toggle.name = "Switch to light mode"
[project.markdown_extensions.admonition]
[project.markdown_extensions.pymdownx.details]
[project.markdown_extensions.pymdownx.superfences]
custom_fences = [
{ name = "mermaid", class = "mermaid", format = "pymdownx.superfences.fence_code_format" }
]
[project.markdown_extensions.pymdownx.tabbed]
alternate_style = true
[project.markdown_extensions.pymdownx.highlight]
anchor_linenums = true
[project.markdown_extensions.pymdownx.inlinehilite]
[project.markdown_extensions.tables]
[project.markdown_extensions.toc]
permalink = true