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Copy pathHLA-B_35_02.txt
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8 lines (7 loc) · 4.94 KB
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HLA_allele Significance test Clinical Relevance Method Experimental methods Reference Armenia_combined_Regions_(n=100) Austria_(n=200) Azores_Central_Islands_(n=59) Azores_Oriental_Islands_(n=43) Azores_Terceira_Island_(n=130) Brazil_Barra_Mansa_Rio_State_Black_(n=73) Brazil_Barra_Mansa_Rio_State_Caucasian_(n=405) Brazil_Belo_Horizonte_Caucasian_(n=95) Brazil_Mixed_(n=108) Brazil_Rio_de_Janeiro_Black_(n=68) Brazil_Rio_de_Janeiro_Caucasian_(n=521) Brazil_Rio_de_Janeiro_Parda_(n=170) Brazil_Terena_(n=60) Brazil_Vale_do_Ribeira_Quilombos_(n=144) Bulgaria_(n=55) Cape_Verde_Northwestern_Islands_(n=62) Cape_Verde_Southeastern_Islands_(n=62) Chile_Santiago_Mixed_(n=70) China_Han_HIV_negative_(n=72) China_Henan_HIV_negative_(n=16) China_Hubei_Han_(n=3732) China_Inner_Mongolia_Region_(n=102) China_Jiangsu_Han_(n=3238) China_Jiangsu_Province_Han_(n=334) China_North_Han_(n=105) China_Qinghai_Province_Hui_(n=110) China_Tibet_Region_Tibetan_(n=158) China_Uyghur_HIV_negative_(n=19) China_Zhejiang_Han_(n=1734) Colombia_Bogotá_Cord_Blood_(n=1463) Costa_Rica_Central_Valley_Mestizo_(G)_(n=221) Costa_Rica_Guanacaste_Mestizo_(G)_(n=110) Croatia_(n=150) Croatia_pop_4_(n=4000) Cuba_Caucasian_(n=70) Cuba_Mixed_Race_(n=42) Czech_Republic_(n=106) Czech_Republic_NMDR_(n=5099) England_Blood_Donors_of_Mixed_Ethnicity_(n=519) England_North_West_(n=298) France_French_Bone_Marrow_Donor_Registry_(n=42623) Gaza_(n=42) Georgia_Svaneti_Region_Svan_(n=80) Georgia_Tibilisi_(n=109) Georgia_Tibilisi_Kurd_(n=31) Germany_DKMS_-_Austria_minority_(n=1698) Germany_DKMS_-_Bosnia_and_Herzegovina_minority_(n=1028) Germany_DKMS_-_China_minority_(n=1282) Germany_DKMS_-_Croatia_minority_(n=2057) Germany_DKMS_-_France_minority_(n=1406) Germany_DKMS_-_German_donors_(n=3456066) Germany_DKMS_-_Greece_minority_(n=1894) Germany_DKMS_-_Italy_minority_(n=1159) Germany_DKMS_-_Netherlands_minority_(n=1374) Germany_DKMS_-_Portugal_minority_(n=1176) Germany_DKMS_-_Romania_minority_(n=1234) Germany_DKMS_-_Spain_minority_(n=1107) Germany_DKMS_-_Turkey_minority_(n=4856) Germany_DKMS_-_United_Kingdom_minority_(n=1043) Germany_pop_6_(n=8862) Germany_pop_8_(n=39689) Greece_pop_6_(n=242) Greece_pop_8_(n=83) Guinea_Bissau_(n=65) Hong_Kong_Chinese_(n=569) Hong_Kong_Chinese_BMDR_(n=7595) Hong_Kong_Chinese_cord_blood_registry_(n=3892) Hong_Kong_Chinese_HKBMDR_HLA_11_loci_(n=5266) India_Delhi_pop_2_(n=90) India_Tamil_Nadu_(n=2492) Indonesia_Java_pop_2_(n=36) Indonesia_Sundanese_and_Javanese_(n=201) Iran_Baloch_(n=100) Ireland_Northern_(n=1000) Ireland_South_(n=250) Israel_Arab_Druze_(n=101) Israel_Arab_pop_2_(n=12301) Israel_Argentina_Jews_(n=4307) Israel_Ashkenazi_and_Non_Ashkenazi_Jews_(n=146) Israel_Ashkenazi_Jews_pop_3_(n=4625) Israel_Bukhara_Jews_(n=2317) Israel_Druze_(n=5914) Israel_Ethiopia_Jews_(n=5928) Israel_Georgia_Jews_(n=4471) Israel_Iran_Jews_(n=8153) Israel_Iraq_Jews_(n=13270) Israel_Kavkazi_Jews_(n=2840) Israel_Libya_Jews_(n=3739) Israel_Morocco_Jews_(n=36718) Israel_Poland_Jews_(n=13871) Israel_Tunisia_Jews_(n=9070) Israel_USA_Jews_(n=6058) Israel_USSR_Jews_(n=45681) Israel_YemenJews_(n=15542) Italy_North_pop_3_(n=97) Italy_pop_5_(n=975) Kenya_Luo_(n=265) Kenya_Nandi_(n=240) Kosovo_(n=124) Libya_Cyrenaica_(n=118)
B*35:02 P =0 .009 Significantly associated with variations in TNF-α secretion Experimentally proven Neutralizing Antibody Assay, IFN-γ Elispot, Cytokine Measurements, HLA Genotyping https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3096794/ 0.04 0.005 0.009 0.013 0.012 0 0.022 0.017 0 0.018 0 0.008 0.031 0.031 0.0007 0.015 0.002 0.002 0 0.005 0.006 0.026 0.00957 0.027 0.013 0.007 0.024 0.005 0.015 0.0093 0.048 0.025 0.009 0.017 0.00707 0.00924 0.00195 0.014 0.01 0.00808 0.028 0.024 0.00691 0.014 0.018 0.012 0.029 0.00288 0.00758 0.01 0.021 0.03 0 0 0.00026 0.00013 0.005 0.0002 0.02 0 0.002 0.03 0.048 0.017 0.028 0.066 0.089 0.013 0.00253 0.016 0.021 0.029 0.03 0.019 0.00848 0.039 0.017 0.019 0.018 0.00714 0 0.033 0 0.006 0.012
B*35:02:01 0.014 0.014 0.0075 0.013 0.0088 0.0012 0.007 0.009 0.0019 0.003 0.00038 0 0.003 0.013
B*35:02:02 0
B*35:02:03
B*35:02:04
Total Frequency 0.04 0.005 0.009 0.013 0.012 0.014 0.014 0 0.022 0.008 0.013 0.009 0.017 0 0.018 0 0.008 0 0.031 0.031 0.001 0.015 0.002 0.002 0 0.005 0.006 0.026 0.001 0.01 0.007 0.009 0.027 0.013 0.007 0.024 0.005 0.015 0.002 0.003 0.009 0.048 0.025 0.009 0.017 0.007 0.009 0.002 0.014 0.01 0.008 0.028 0.024 0.007 0.014 0.018 0.012 0.029 0.003 0.008 0.01 0.021 0.03 0 0 0 0 0 0.005 0 0 0.003 0.02 0 0.002 0.03 0.048 0.017 0.028 0.066 0.089 0.013 0.003 0.016 0.021 0.029 0.03 0.019 0.008 0.039 0.017 0.019 0.018 0.007 0 0.033 0 0.006 0.012 0.013