Hello,
Can you provide more information on how to specify causal variants when simulating the phenotype data?
From looking at the code it seems to expect comma separated file, with variant ID, and then columns indicating effect sizes for each trait. Is this correct?
When I try to use the causal_list parameter, it always says 'Cannot open the Causal SNP list'..., despite the file being mounted appropriately.
I can't tell whether this is due to a formatting issue, or a mounting issue.
You advice would be much appreciated.
Oliver
Hello,
Can you provide more information on how to specify causal variants when simulating the phenotype data?
From looking at the code it seems to expect comma separated file, with variant ID, and then columns indicating effect sizes for each trait. Is this correct?
When I try to use the causal_list parameter, it always says 'Cannot open the Causal SNP list'..., despite the file being mounted appropriately.
I can't tell whether this is due to a formatting issue, or a mounting issue.
You advice would be much appreciated.
Oliver