Bump version to 1.0.1 and add missing viz_module dependency #17
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| name: CI | |
| on: | |
| push: | |
| branches: [ main, master ] | |
| pull_request: | |
| branches: [ main, master ] | |
| jobs: | |
| test: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| python-version: ["3.9", "3.10", "3.11"] | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install conda | |
| uses: conda-incubator/setup-miniconda@v3 | |
| with: | |
| auto-update-conda: true | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install PseudoScope from bioconda channel | |
| shell: bash -l {0} | |
| run: | | |
| conda config --add channels conda-forge | |
| conda config --add channels bioconda | |
| conda create -n pseudoscope -c conda-forge -c bioconda pseudoscope python=${{ matrix.python-version }} -y | |
| conda activate pseudoscope | |
| - name: Test PseudoScope help | |
| shell: bash -l {0} | |
| run: | | |
| conda activate pseudoscope | |
| pseudoscope --version | |
| pseudoscope --help |