Initial code and processed data release

Author: arieqwer

.gitignore

@@ -0,0 +1,7 @@
+.DS_Store
+__pycache__/
+*.pyc
+.ipynb_checkpoints/
+outputs/
+*.log
+

DATA_AVAILABILITY.md

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+# Data availability
+
+This repository contains processed source tables sufficient to reproduce the display items, source tables, and key numerical results.
+
+Large upstream files are not included because they are unnecessary for figure/table reproduction and exceed practical GitHub repository limits. Excluded files include raw Google Earth Engine exports, ERA5/ERA5-Land downloads and full city-by-interval remote-sensing panels.
+
+The upstream datasets are publicly available from their original providers, including global urban metadata, MODIS land-surface temperature/vegetation products, ERA5 and ERA5-Land meteorological products, TerraClimate hydroclimatic products, anthropogenic-heat products, and urban-form datasets. 
+
+The processed files in `data/processed/extended_outputs_local/` are the source data for the display items. The `data/source_tables/` directory contains source tables as CSV files.

LICENSE

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+MIT License
+
+Copyright (c) 2026
+
+Permission is hereby granted, free of charge, to any person obtaining a copy
+of this software and associated documentation files (the "Software"), to deal
+in the Software without restriction, including without limitation the rights
+to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+copies of the Software, and to permit persons to whom the Software is
+furnished to do so, subject to the following conditions:
+
+The above copyright notice and this permission notice shall be included in all
+copies or substantial portions of the Software.
+
+THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
+SOFTWARE.
+

README.md

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+# Urban green-refuge reliability during dry hot nights
+
+This repository is a curated reproducibility package for a *Nature Cities* submission. It contains processed source data and scripts needed to regenerate the display items, source tables, and key reported numerical results from processed data.
+
+## What is included
+
+- `data/processed/metadata/`: compact city metadata and retained-panel summaries used by the plotting scripts.
+- `data/processed/extended_outputs_local/`: processed analysis summaries used as source data for figures, tables, and key results.
+- `data/source_tables/`: source tables as CSV files.
+- `scripts/`: scripts that regenerate display items, source tables, and a key-results check from the processed data.
+
+## What is not included
+
+Raw satellite/climate products and large upstream intermediate panels are not included. These include Google Earth Engine exports, ERA5/ERA5-Land extraction products, full MODIS/urban panel files, and multi-GB analysis panels. 
+
+The excluded upstream products come from public or third-party data providers and may be obtained from their original sources under the corresponding licenses.
+
+## Reproduce the figures and tables
+
+Create a Python environment using either `requirements.txt` or `environment.yml`, then run:
+
+```bash
+python scripts/make_main_and_selected_supplementary_figures.py
+python scripts/make_figure_5_reliability_pathway.py
+python scripts/make_supplementary_figures_s1_s2.py
+python scripts/make_supplementary_figure_s7_robustness.py
+python scripts/export_supplementary_tables.py
+python scripts/validate_key_results.py
+```
+
+Generated files are written to:
+
+- `outputs/figures/main/`
+- `outputs/figures/supplementary/`
+- `outputs/tables/`
+
+## Script-to-output map
+
+- `make_main_and_selected_supplementary_figures.py`: display items generated from the processed analysis summaries.
+- `make_figure_5_reliability_pathway.py`: main Figure 5 from the reliability-pathway source tables.
+- `make_supplementary_figures_s1_s2.py`: supplementary figures.
+- `make_supplementary_figure_s7_robustness.py`: robustness-check supplementary figure.
+- `export_supplementary_tables.py`: source tables as Markdown tables.
+- `validate_key_results.py`: prints key numerical findings from processed source tables.
+
+## Notes for review and reuse
+
+Population quantities are represented-panel burdens, not global population-at-risk estimates. Counterfactual pathway summaries are association-based standardizations under fitted models and are not intervention simulations.

data/processed/README.md

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+# Processed data
+
+This directory contains compact processed source files used to reproduce display items and reported numerical results.
+
+- `metadata/` contains retained-city metadata and compact state summaries.
+- `extended_outputs_local/` contains analysis-ready summary tables and the compact reliability-pathway model panel.
+- `file_manifest_sha256.csv` records file sizes and SHA-256 hashes for copied files.

data/processed/extended_outputs_local/06_sync_prevalence_null_robustness/corrected_circular_shift_annual_comparison.csv

@@ -0,0 +1,24 @@
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data/processed/extended_outputs_local/06_sync_prevalence_null_robustness/corrected_circular_shift_null_slope_summary.csv

@@ -0,0 +1,4 @@
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data/processed/extended_outputs_local/06_sync_prevalence_null_robustness/corrected_core_highveg_annual_sync_summary.csv

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data/processed/extended_outputs_local/06_sync_prevalence_null_robustness/corrected_core_highveg_sync_event_annual_summary.csv

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data/processed/extended_outputs_local/06_sync_prevalence_null_robustness/corrected_leave_one_region_out_sync_trend.csv

@@ -0,0 +1,9 @@
+left_out_region,coef_year,p_year,r2
+Australia and New Zealand,0.00251700810450525,8.684712312710872e-07,0.6919053724899613
+Central and Southern Asia,0.0029096897539891784,1.366887605923178e-06,0.6785685841340889
+Northern America,0.0027015271030006657,1.5064317327560322e-06,0.6756379895463818
+Europe,0.002404256928377392,1.5297309440207372e-06,0.6751729100357029
+Northern Africa and Western Asia,0.002387479692895918,1.7042051569266934e-06,0.6718817052309131
+Sub-Saharan Africa,0.002500751973312887,2.7019686267012065e-06,0.6574702714868517
+Eastern and South-Eastern Asia,0.002387389967730159,7.060055090857045e-06,0.6254424498944491
+Latin America and the Caribbean,0.002104976125315515,1.8009322848368163e-05,0.5914524644089207