update

jenniferxu1101 · jenniferxu1101 · commit 2b1bd70ed0f8 · 2026-06-22T15:45:27.000-04:00
diff --git a/README.md b/README.md
@@ -20,9 +20,22 @@ target="_blank"><code>remotes</code></a> R package:
 remotes::install_github("UofUEpiBio/Comprehensive_cohort", ref="cran")
 ```
 
+
+    ── R CMD build ─────────────────────────────────────────────────────────────────
+    * checking for file ‘/private/var/folders/kc/516dnvf974g17y535_20gss80000gn/T/RtmpeBVO7G/remotes1097750b9573c/UofUEpiBio-Comprehensive_cohort-ffcfab7/DESCRIPTION’ ... OK
+    * preparing ‘comprehensivecohort’:
+    * checking DESCRIPTION meta-information ... OK
+    * checking for LF line-endings in source and make files and shell scripts
+    * checking for empty or unneeded directories
+    Removed empty directory ‘comprehensivecohort/.devcontainer’
+    Removed empty directory ‘comprehensivecohort/.github’
+    Removed empty directory ‘comprehensivecohort/data-raw’
+    Removed empty directory ‘comprehensivecohort/vignettes’
+    * building ‘comprehensivecohort_0.0.9000.tar.gz’
+
 Or install from CRAN:
 
-## Examples
+## Example
 
 The package includes a simulated dataset based on the TOIB study, a
 comprehensive cohort study aiming to determine whether to advice older
diff --git a/README.qmd b/README.qmd
@@ -19,7 +19,7 @@ Or install from CRAN:
 
 
 
-## Examples
+## Example
 
 The package includes a simulated dataset based on the TOIB study, a comprehensive cohort study aiming to determine whether to advice older adults with chronic knee pain to apply either topical or oral non-steroidal anti-inflammatory drugs (NSAIDs) for knee pain management. The dataset include 563 observations with outcome $Y$ as Western Ontario and McMaster Universities Osteoarthritis Index (WOMAC) pain score ($0-100$) at 12 months. Some outcome observations might be missing (denoted as NA in $Y$). Column $M$ is a outcome missingness indicator: $1$ if $Y$ is observed, $0$ if $Y$ is missing. Other variables in the dataset include $t$ the treatment indicator ($1$ for topical NSAIDs, $0$ for oral NSAIDs), and $R$ the randomization consent indicator ($1$ for RCT, $0$ for OBS). Rest of the columns are baseline covariates (age, baseline WOMAC pain score, expected pain one year later, chronic pain grade). 
 

Original file line number	Diff line number	Diff line change
`@@ -19,7 +19,7 @@ Or install from CRAN:`
`19`	`19`
`20`	`20`
`21`	`21`
`22`		`-## Examples`
	`22`	`+## Example`
`23`	`23`
`24`	`24`	The package includes a simulated dataset based on the TOIB study, a comprehensive cohort study aiming to determine whether to advice older adults with chronic knee pain to apply either topical or oral non-steroidal anti-inflammatory drugs (NSAIDs) for knee pain management. The dataset include 563 observations with outcome $Y$ as Western Ontario and McMaster Universities Osteoarthritis Index (WOMAC) pain score ($0-100$) at 12 months. Some outcome observations might be missing (denoted as NA in $Y$). Column $M$ is a outcome missingness indicator: $1$ if $Y$ is observed, $0$ if $Y$ is missing. Other variables in the dataset include $t$ the treatment indicator ($1$ for topical NSAIDs, $0$ for oral NSAIDs), and $R$ the randomization consent indicator ($1$ for RCT, $0$ for OBS). Rest of the columns are baseline covariates (age, baseline WOMAC pain score, expected pain one year later, chronic pain grade).
`25`	`25`